STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2285Hypothetical protein. (358 aa)    
Predicted Functional Partners:
OSCT_2512
Phosphoadenosine phosphosulfate reductase.
  
 
 0.932
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
  0.790
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
  0.790
OSCT_2284
Von Willebrand factor type A.
     
0.783
OSCT_2283
Hypothetical protein.
       0.762
OSCT_2286
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.580
OSCT_0655
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.509
OSCT_1172
Phosphate ABC transporter, inner membrane subunit PstA.
     
 0.496
OSCT_1299
Oxidoreductase, molybdopterin binding.
     
  0.417
OSCT_2278
LPXTG-motif cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
     
  0.417
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.