STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2296Tetratricopeptide domain-containing protein. (1011 aa)    
Predicted Functional Partners:
OSCT_2295
Hypothetical protein.
       0.777
OSCT_2294
AAA ATPase central domain protein.
       0.773
OSCT_1227
PAS sensor protein.
   
 0.763
OSCT_2297
Hypothetical protein.
       0.532
OSCT_2221
Multi-sensor hybrid histidine kinase.
    
 0.531
OSCT_1310
PAS fold family protein.
   
 0.524
OSCT_0739
Sensory box histidine kinase/response regulator.
    
 0.516
OSCT_0556
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
   
  0.493
OSCT_0648
GAF sensor hybrid histidine kinase.
    
 0.482
OSCT_1234
PAS sensor protein.
    
 0.482
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.