Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2308AIG2 family protein. (154 aa)    
Predicted Functional Partners:
OSCT_2309
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.737
OSCT_2310
Agmatine deiminase; Belongs to the agmatine deiminase family.
       0.726
OSCT_2275
Hypothetical protein.
  
     0.710
OSCT_0232
HEAT repeat-containing PBS lyase.
  
     0.694
OSCT_2694
HEAT domain containing protein.
  
     0.664
OSCT_2311
Dihydroxyacetone kinase, DhaK subunit.
       0.659
OSCT_0460
GAF domain-containing protein.
  
     0.630
OSCT_2347
Conserved repeat domain protein.
  
     0.622
OSCT_2698
Na-Ca exchanger/integrin-beta4.
  
     0.597
OSCT_2312
Dihydroxyacetone kinase, L subunit.
       0.584
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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