STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2351Glycosyl transferase family protein. (323 aa)    
Predicted Functional Partners:
OSCT_2350
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.900
OSCT_2352
Glycosyl transferase family protein.
 
 
  0.851
OSCT_1792
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
 
      0.827
OSCT_2349
PAS sensor protein.
       0.780
OSCT_2353
Protein of unknown function UPF0044.
       0.776
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.716
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.706
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.706
OSCT_0716
Glycosyl transferase, group 2 family protein.
  
     0.654
OSCT_0715
Glycosyl transferase family 2.
  
     0.636
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.