Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
OSCT_2352Glycosyl transferase family protein. (249 aa)    
Predicted Functional Partners:
OSCT_2351
Glycosyl transferase family protein.
 
     0.844
OSCT_2350
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.790
OSCT_2349
PAS sensor protein.
       0.773
OSCT_2353
Protein of unknown function UPF0044.
       0.771
OSCT_2371
Hypothetical protein.
  
 
  0.600
OSCT_2348
Hypothetical protein.
       0.541
OSCT_1178
Hypothetical protein.
  
     0.528
OSCT_2008
Glycosyl transferase family 2.
 
  
  0.510
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.476
OSCT_0016
Glycosyl transferase family 2.
 
 
  0.456
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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