STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2388CRISPR-associated Csm3 family protein. (283 aa)    
Predicted Functional Partners:
OSCT_2392
Hydrolase.
 
 
 0.973
OSCT_2390
Hypothetical protein.
 
    0.949
OSCT_2391
Hypothetical protein.
 
     0.948
OSCT_0084
Hydrolase.
 
 
 0.889
OSCT_2387
Hypothetical protein.
 
    
0.847
OSCT_2393
Hypothetical protein.
 
   
 0.795
OSCT_0077
Hypothetical protein.
 
     0.786
OSCT_0082
Hypothetical protein.
 
    0.785
OSCT_2385
Hypothetical protein.
       0.785
OSCT_0083
Hypothetical protein.
 
     0.782
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.