STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2436Putative anti-sigma regulatory factor, serine/threonine protein kinase. (142 aa)    
Predicted Functional Partners:
OSCT_2437
Sulfate transporter/antisigma-factor antagonist STAS.
  
  0.900
OSCT_2434
Protein serine/threonine phosphatase.
 
  0.851
OSCT_2692
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.827
OSCT_1227
PAS sensor protein.
  
 
 0.797
OSCT_1295
Anti-sigma-factor antagonist.
  
  0.756
OSCT_1310
PAS fold family protein.
  
 
 0.750
OSCT_0031
Protein serine phosphatase with GAF(s) sensor(s).
 
  0.748
OSCT_2092
Stage II sporulation E family protein.
 
 0.747
OSCT_0739
Sensory box histidine kinase/response regulator.
  
 
 0.745
OSCT_0523
Stage II sporulation E family protein.
 
  0.715
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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