Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2443Glycosyl transferase group 1. (412 aa)    
Predicted Functional Partners:
OSCT_2444
Membrane protein-like protein.
 
     0.811
OSCT_2442
Hypothetical protein.
 
     0.749
OSCT_2701
Glycosyl transferase group 1.
  
     0.621
OSCT_0514
Glycosyl transferase group 1.
  
     0.584
OSCT_2947
Glycosyl transferase group 1.
  
     0.551
OSCT_2340
Glycosyl transferase group 1.
  
     0.531
OSCT_2623
Glycosyl transferase group 1.
 
     0.523
OSCT_1855
Phosphoheptose isomerase.
   
  0.496
OSCT_2445
Hypothetical protein.
       0.484
OSCT_1005
Glycoside hydrolase family 13 protein.
  
  0.473
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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