STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2447Protein of unknown function DUF182. (338 aa)    
Predicted Functional Partners:
OSCT_3122
Hypothetical protein.
 
 0.982
OSCT_0122
Molybdopterin dehydrogenase FAD-binding.
 
 
 0.965
OSCT_1738
LAO/AO transport system ATPase.
 
   
  0.912
OSCT_1418
Xanthine dehydrogenase.
 
 
 0.881
OSCT_0123
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 
 0.871
OSCT_0124
(2Fe-2S)-binding domain protein.
 
  
 0.871
OSCT_2448
Hypothetical protein.
       0.773
OSCT_2894
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
    
  0.477
OSCT_3166
Molybdopterin converting factor, subunit 1.
  
  
 0.428
OSCT_0959
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.417
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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