Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
OSCT_2457Beta-galactosidase. (447 aa)    
Predicted Functional Partners:
OSCT_3188
Mannose-6-phosphate isomerase.
 
 
 0.934
OSCT_1013
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 31 family.
 
 0.872
OSCT_0839
Alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.831
OSCT_2458
Major facilitator transporter.
       0.774
OSCT_1254
Glycosyltransferase 36.
    
 0.730
OSCT_1386
Glycoside hydrolase family 2 TIM barrel.
 
  
 0.498
OSCT_1382
Alpha amylase catalytic region.
  
 
 0.497
OSCT_0469
Hypothetical protein.
   
 
 0.414
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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