Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2458Major facilitator transporter. (413 aa)    
Predicted Functional Partners:
OSCT_2457
Beta-galactosidase.
       0.774
OSCT_1225
Major facilitator transporter.
  
     0.618
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.581
OSCT_2792
Hypothetical protein.
  
     0.525
OSCT_3118
Hypothetical protein.
  
     0.499
OSCT_2793
Hypothetical protein.
  
     0.492
OSCT_1100
Hypothetical protein.
  
     0.466
OSCT_2790
Hypothetical protein.
  
     0.452
OSCT_0837
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).
     
  0.435
OSCT_2789
Hypothetical protein.
  
     0.430
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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