STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2463Histidine kinase. (359 aa)    
Predicted Functional Partners:
OSCT_0495
Response regulator receiver.
  
  0.959
OSCT_2464
Two component LuxR family transcriptional regulator.
  0.950
OSCT_2681
Two component LuxR family transcriptional regulator.
  
  0.914
OSCT_0728
Histidine kinase dimerization and phosphoacceptor region.
 
  
 
0.864
OSCT_2519
Two-component system response regulator.
 
  0.842
OSCT_1713
Two component transcriptional regulator, LuxR family.
 
  0.839
OSCT_1232
Two component LuxR family transcriptional regulator.
 
  0.837
OSCT_1461
Two component LuxR family transcriptional regulator.
 
  0.836
OSCT_2224
Two component transcriptional regulator, LuxR family.
 
  0.836
OSCT_2235
Two component LuxR family transcriptional regulator.
 
  0.836
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.