close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2468Glycosyl transferase, group 1. (386 aa)    
Predicted Functional Partners:
OSCT_2469
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.773
OSCT_1262
Glycosyl transferase, group 1.
  
     0.663
OSCT_1533
O-antigen polymerase.
  
 
  0.659
OSCT_0487
O-antigen polymerase.
  
 
  0.655
OSCT_0970
Hypothetical protein.
  
     0.614
OSCT_0476
O-antigen polymerase.
  
 
  0.613
OSCT_0971
Hypothetical protein.
  
     0.613
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.601
OSCT_1005
Glycoside hydrolase family 13 protein.
  
  0.543
OSCT_1507
Hypothetical protein.
  
     0.504
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.