STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2502Regulator of chromosome condensation RCC1. (778 aa)    
Predicted Functional Partners:
OSCT_2922
Proton-translocating NADH-quinone oxidoreductase, chain M.
    
 
 0.833
OSCT_2923
Proton-translocating NADH-quinone oxidoreductase, chain M.
    
 
 0.833
OSCT_2698
Na-Ca exchanger/integrin-beta4.
 
 0.785
OSCT_0910
Peptidase S8 and S53 subtilisin kexin sedolisin.
  
 0.770
OSCT_0024
Hypothetical protein.
  
 0.746
OSCT_2203
Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
 
 0.650
OSCT_2104
Peptidase S8 and S53 subtilisin kexin sedolisin.
  
 0.636
OSCT_2904
Sulphate transporter.
   
 
 0.616
OSCT_1363
Sulphate transporter.
    
   0.608
OSCT_3080
Ferredoxin.
   
   0.596
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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