STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2505Hypothetical protein. (368 aa)    
Predicted Functional Partners:
OSCT_1035
Cell wall hydrolase/autolysin.
  
 
   0.926
OSCT_1726
Hypothetical protein.
 
    0.768
OSCT_1215
ATPase.
  
     0.724
OSCT_1261
Permease domain protein.
   
 
 0.696
OSCT_1742
Hypothetical protein.
   
 
 0.696
OSCT_2137
Protein of unknown function DUF214.
   
 
 0.696
OSCT_2138
Protein of unknown function DUF214.
   
 
 0.696
OSCT_2605
ABC transporter related protein.
 
 
 
 0.663
OSCT_1782
Cell division FtsK/SpoIIIE.
 
  
 0.657
OSCT_2807
roadblock/LC7 family protein.
  
     0.640
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.