Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OSCT_2512Phosphoadenosine phosphosulfate reductase. (276 aa)    
Predicted Functional Partners:
OSCT_2513
Hypothetical protein.
 
     0.955
OSCT_2514
Hypothetical protein.
 
     0.952
OSCT_2511
Hypothetical protein.
 
 
   0.946
OSCT_2285
Hypothetical protein.
  
 
 0.932
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
 0.823
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
 0.823
OSCT_1359
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
  
 0.810
OSCT_2510
Hypothetical protein.
       0.778
OSCT_2509
Hypothetical protein.
       0.729
OSCT_0426
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.720
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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