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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2523Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-2. (139 aa)    
Predicted Functional Partners:
OSCT_2522
Ribulose bisophosphate carboxylase; Belongs to the RuBisCO large chain family.
 
 0.998
OSCT_2524
AAA ATPase, central region.
 
  
 0.963
OSCT_0899
Carbonate dehydratase.
    
 0.927
OSCT_2525
Phosphoribulokinase.
 
  
 0.891
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.760
OSCT_2306
Phosphoribulokinase/uridine kinase.
 
  
 0.472
OSCT_0110
Hypothetical protein.
    
 0.433
OSCT_0142
Haloacid dehalogenase domain protein hydrolase.
    
 0.433
OSCT_0159
Haloacid dehalogenase superfamily enzyme, subfamily IA.
    
 0.423
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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