Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2557Mutual gliding protein A. (194 aa)    
Predicted Functional Partners:
OSCT_2556
Response regulator receiver.
 
 
 0.973
OSCT_0217
Roadblock/LC7 family protein.
 
 
 0.921
OSCT_0216
roadblock/LC7 family protein.
 
 
 0.766
OSCT_0999
Hypothetical protein.
 
     0.758
OSCT_0219
Hypothetical protein.
 
 
   0.750
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
  
 0.681
OSCT_2807
roadblock/LC7 family protein.
 
 
 0.677
OSCT_2555
Hypothetical protein.
       0.667
OSCT_0230
roadblock/LC7 family protein.
  
 
 0.633
OSCT_0238
roadblock/LC7 family protein.
  
 
 0.633
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.