Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OSCT_2638LmbE family protein. (304 aa)    
Predicted Functional Partners:
OSCT_0511
Hypothetical protein.
  
     0.744
OSCT_0510
Hypothetical protein.
  
     0.738
OSCT_2896
Glycosyl transferase group 1.
  
 
  0.666
OSCT_2357
Glutaredoxin-like protein.
  
   
 0.643
OSCT_2639
Fumarylacetoacetate (FAA) hydrolase.
  
 
  0.619
OSCT_0604
Hypothetical protein.
  
     0.543
OSCT_1225
Major facilitator transporter.
  
     0.505
OSCT_1250
Membrane-flanked domain protein.
  
     0.502
OSCT_2479
Hypothetical protein.
 
     0.482
OSCT_2791
Hypothetical protein.
  
     0.451
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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