STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2652NADPH-dependent FMN reductase. (435 aa)    
Predicted Functional Partners:
OSCT_2653
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding.
       0.780
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
  0.746
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
  0.746
OSCT_0348
NMT1/THI5-like domain-containing protein.
  
 
  0.552
OSCT_2153
Hypothetical protein.
  
 
  0.552
OSCT_2864
NMT1/THI5-like domain-containing protein.
  
 
  0.552
OSCT_2512
Phosphoadenosine phosphosulfate reductase.
   
 
 0.532
OSCT_1132
Luciferase-like monooxygenase.
  
 0.498
OSCT_1604
Luciferase family protein.
  
 0.498
OSCT_1723
Luciferase-like protein.
  
 0.498
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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