STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2674FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits. (822 aa)    
Predicted Functional Partners:
OSCT_2293
Serine/threonine protein kinase with PASTA sensor(s).
 
 
 0.897
OSCT_3196
Protein kinase.
 
 
 0.897
OSCT_1227
PAS sensor protein.
  
 
 0.853
OSCT_1310
PAS fold family protein.
  
 
 0.841
OSCT_2630
Multi-sensor signal transduction histidine kinase.
 
 
 0.838
OSCT_0735
ABC-2 type transporter.
  
 0.815
OSCT_2206
GAF sensor signal transduction histidine kinase.
 
 
 0.790
OSCT_0222
Multi-sensor signal transduction histidine kinase.
  
 
  0.762
OSCT_2703
Multi-sensor hybrid histidine kinase.
  
 
  0.762
OSCT_2167
Serine/threonine protein kinase.
  
 0.752
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.