STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2689Hypothetical protein. (278 aa)    
Predicted Functional Partners:
OSCT_2688
Thioesterase superfamily protein.
       0.773
OSCT_2687
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.768
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
  
     0.754
OSCT_2685
AAA-4 family protein.
 
     0.726
OSCT_2686
ABC transporter related protein.
       0.726
OSCT_1215
ATPase.
  
     0.687
OSCT_0279
Transcriptional regulator-like protein.
  
     0.668
OSCT_1105
Hypothetical protein.
  
     0.655
OSCT_2442
Hypothetical protein.
  
     0.650
OSCT_2808
TPR repeat-containing protein.
  
     0.637
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.