STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2701Glycosyl transferase group 1. (370 aa)    
Predicted Functional Partners:
OSCT_0569
Glycosyl transferase group 1.
 
     0.866
OSCT_3018
Glycosyl transferase group 1.
 
     0.780
OSCT_2700
Beta-lactamase domain-containing protein.
       0.774
OSCT_0457
Glycosyl transferase group 1.
  
     0.730
OSCT_1609
Glycosyl transferase group 1.
  
     0.705
OSCT_0626
Glycosyl transferase group 1.
  
     0.667
OSCT_1276
Glycosyl transferase, group 1.
  
     0.623
OSCT_2443
Glycosyl transferase group 1.
  
     0.621
OSCT_1262
Glycosyl transferase, group 1.
  
     0.617
OSCT_1686
Hypothetical protein.
  
     0.576
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.