STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2702Initiation factor 2B related protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (302 aa)    
Predicted Functional Partners:
OSCT_2798
Selenocysteine-specific translation elongation factor.
   
 0.920
OSCT_0033
Nucleotidyl transferase.
   
 0.720
OSCT_0947
Nucleotidyl transferase.
   
 0.720
OSCT_1631
Nucleotidyl transferase.
   
 0.720
OSCT_3063
Nucleotidyl transferase.
   
 0.720
OSCT_2703
Multi-sensor hybrid histidine kinase.
       0.610
OSCT_3001
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.503
OSCT_2395
Hypothetical protein.
    
   0.502
OSCT_2522
Ribulose bisophosphate carboxylase; Belongs to the RuBisCO large chain family.
    
 0.476
hisZ
histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
   
 
 0.467
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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