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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2724Phospholipase D/transphosphatidylase. (379 aa)    
Predicted Functional Partners:
OSCT_2727
Forkhead-associated protein.
 
 
   0.755
OSCT_2725
Hypothetical protein.
       0.737
OSCT_2726
Hypothetical protein.
       0.721
OSCT_0837
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).
    
 0.711
OSCT_2730
Protein kinase.
 
  
 0.699
OSCT_2728
Von Willebrand factor type A.
 
     0.632
OSCT_2729
Protein serine/threonine phosphatase.
  
    0.569
OSCT_2395
Hypothetical protein.
    
 0.529
OSCT_1488
NifU family SUF system FeS assembly protein.
   
   0.503
OSCT_2072
NifU family SUF system FeS assembly protein.
   
   0.503
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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