Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2745Hypothetical protein. (258 aa)    
Predicted Functional Partners:
OSCT_0919
Hypothetical protein.
   
 0.661
OSCT_2541
Hypothetical protein.
   
 0.661
OSCT_3134
Hypothetical protein.
   
 0.661
OSCT_0970
Hypothetical protein.
   
 0.552
OSCT_0971
Hypothetical protein.
   
 0.552
OSCT_0851
Hypothetical protein.
  
 
 0.462
OSCT_2744
Hexapaptide repeat-containing transferase.
       0.434
OSCT_2747
Asparagine synthase (glutamine-hydrolyzing).
     
 0.407
OSCT_1254
Glycosyltransferase 36.
     
 0.404
nadE-2
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.402
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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