STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2791Hypothetical protein. (1221 aa)    
Predicted Functional Partners:
OSCT_2792
Hypothetical protein.
 
     0.947
OSCT_2790
Hypothetical protein.
 
     0.919
OSCT_2793
Hypothetical protein.
 
     0.915
OSCT_2022
SNF2-related helicase.
    
 0.910
OSCT_2789
Hypothetical protein.
 
     0.884
OSCT_0392
Immunoglobulin I-set domain protein.
    
 0.881
OSCT_2395
Hypothetical protein.
    
 0.872
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.872
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.858
OSCT_1424
AMP-dependent synthetase and ligase.
  
 
 
 0.846
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.