STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2845Hypothetical protein. (231 aa)    
Predicted Functional Partners:
OSCT_1227
PAS sensor protein.
   
 0.796
OSCT_1310
PAS fold family protein.
  
 0.686
OSCT_0739
Sensory box histidine kinase/response regulator.
   
 0.667
OSCT_1228
Multi-sensor signal transduction histidine kinase.
    
 0.613
OSCT_0648
GAF sensor hybrid histidine kinase.
    
 0.572
OSCT_1234
PAS sensor protein.
    
 0.572
OSCT_1932
PAS fold family protein.
    
 0.572
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
       0.497
OSCT_2844
Histone deacetylase superfamily.
       0.487
OSCT_2841
Hypothetical protein.
  
 
  0.474
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.