Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2848Peptidase M50. (370 aa)    
Predicted Functional Partners:
OSCT_2847
Hypothetical protein.
       0.753
OSCT_1568
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.634
OSCT_1567
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
  
 0.615
OSCT_2849
Response regulator receiver.
  
    0.563
OSCT_2581
Hypothetical protein.
  
     0.522
OSCT_2304
Putative GAF sensor protein.
 
    0.497
OSCT_0628
Hypothetical protein.
 
    0.485
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.470
OSCT_2730
Protein kinase.
   
    0.464
OSCT_0551
Glutamate synthase (ferredoxin).
     
 0.454
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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