STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2880Tagatose 1,6-diphosphate aldolase. (341 aa)    
Predicted Functional Partners:
OSCT_1148
Hypothetical protein; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.974
OSCT_0134
Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.911
OSCT_0135
Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
 
  
 0.809
OSCT_0917
Hypothetical protein.
  
  
 0.691
OSCT_1616
Glycosyl hydrolase 53 protein.
  
  
 0.691
OSCT_2457
Beta-galactosidase.
  
  
 0.691
OSCT_1717
Hypothetical protein.
   
    0.602
OSCT_3054
Hypothetical protein.
   
    0.602
OSCT_2879
CBS domain containing membrane protein.
       0.553
OSCT_2881
Tripartite ATP-independent periplasmic transporter DctQ component.
       0.538
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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