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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2898Glycosyl transferase, group 1. (414 aa)    
Predicted Functional Partners:
OSCT_2899
Glycosyl transferase family 2.
 
 0.984
OSCT_2901
Polysaccharide biosynthesis protein.
 
    0.866
OSCT_2903
Glycosyl transferase family 2.
    0.864
OSCT_2900
Hypothetical protein.
 
 
   0.831
OSCT_2902
NAD-dependent epimerase/dehydratase.
 
 
  0.822
OSCT_2896
Glycosyl transferase group 1.
 
    
0.578
OSCT_2897
Glycosyl transferase family protein.
  
    0.568
OSCT_1005
Glycoside hydrolase family 13 protein.
  
  0.558
OSCT_0028
Glycosyl transferase group 1.
  
    0.525
OSCT_1468
Hypothetical protein.
  
     0.512
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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