STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2903Glycosyl transferase family 2. (345 aa)    
Predicted Functional Partners:
OSCT_2899
Glycosyl transferase family 2.
 
 
 0.884
OSCT_2898
Glycosyl transferase, group 1.
    0.866
OSCT_2901
Polysaccharide biosynthesis protein.
  
    0.773
OSCT_2902
NAD-dependent epimerase/dehydratase.
  
 
  0.768
OSCT_2900
Hypothetical protein.
   
   0.757
OSCT_0713
Glycosyl transferase family protein.
 
 
  0.665
OSCT_0715
Glycosyl transferase family 2.
  
     0.628
OSCT_0853
Glycosyl transferase family protein.
 
     0.624
OSCT_2897
Glycosyl transferase family protein.
 
     0.620
OSCT_0720
Glycosyl transferase, group 2 family protein.
 
 
 0.533
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.