STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2913Glycosyl transferase family protein. (324 aa)    
Predicted Functional Partners:
OSCT_0852
Glycosyl transferase, group 1.
 
    0.937
OSCT_0713
Glycosyl transferase family protein.
  
    0.683
OSCT_2914
Amine oxidase.
       0.678
OSCT_0716
Glycosyl transferase, group 2 family protein.
  
     0.658
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.651
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.651
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.651
OSCT_1346
Glycosyl transferase family 2.
  
     0.634
OSCT_1345
Glycosyl transferase family protein.
  
    0.633
OSCT_2912
Hypothetical protein.
       0.631
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.