Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2991Hypothetical protein. (373 aa)    
Predicted Functional Partners:
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
   
 0.989
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
   
 0.989
OSCT_2992
Plastoquinol--plastocyanin reductase.
  
 0.948
OSCT_2169
AD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.943
OSCT_2597
Cytochrome c oxidase, subunit II.
   
 0.938
OSCT_0472
Cytochrome c class I.
  
 0.934
OSCT_2596
Cytochrome c oxidase, subunit II.
  
 0.934
OSCT_2993
Cytochrome b/b6 domain protein.
 
 0.933
OSCT_2663
Polysulphide reductase NrfD.
 
 
 0.916
OSCT_3141
YD repeat protein.
  
 
 0.815
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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