STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
OSCT_2992Plastoquinol--plastocyanin reductase. (154 aa)    
Predicted Functional Partners:
OSCT_2993
Cytochrome b/b6 domain protein.
 
 0.999
OSCT_1909
NADH dehydrogenase (quinone).
  
 0.998
OSCT_2597
Cytochrome c oxidase, subunit II.
 
 0.996
OSCT_0472
Cytochrome c class I.
  
 0.995
OSCT_2596
Cytochrome c oxidase, subunit II.
  
 0.995
OSCT_2599
Cytochrome c oxidase subunit III.
 
 0.994
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 0.987
OSCT_2930
NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
   
 0.984
OSCT_2946
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 0.983
OSCT_2303
Peptidase M16 domain protein; Belongs to the peptidase M16 family.
   
 0.981
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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