Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2995Cupin 2 domain-containing protein. (206 aa)    
Predicted Functional Partners:
OSCT_3200
GCN5-related N-acetyltransferase.
  
 
 0.896
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 0.890
OSCT_2673
Helix-turn-helix domain-containing protein.
 
 
0.778
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.758
OSCT_0033
Nucleotidyl transferase.
    
  0.752
OSCT_0947
Nucleotidyl transferase.
    
  0.752
OSCT_1631
Nucleotidyl transferase.
    
  0.752
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
  0.724
cobB
Silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
  
 
  0.688
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
  
 
 0.603
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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