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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2999Hypothetical protein. (283 aa)    
Predicted Functional Partners:
OSCT_3000
Cytochrome c family protein.
 
 
 0.956
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.949
OSCT_1583
Thioredoxin domain-containing protein.
  
 0.886
OSCT_3085
Thioredoxin; Belongs to the thioredoxin family.
  
 0.886
OSCT_2998
Hypothetical protein.
  
 
 0.876
OSCT_3080
Ferredoxin.
   
 
 0.815
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.713
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
    
 0.713
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 0.702
OSCT_0974
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.677
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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