STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3000Cytochrome c family protein. (415 aa)    
Predicted Functional Partners:
OSCT_2999
Hypothetical protein.
 
 
 0.956
OSCT_1909
NADH dehydrogenase (quinone).
    
   0.947
OSCT_0556
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
 0.926
OSCT_0553
Hypothetical protein.
  
 0.916
OSCT_2673
Helix-turn-helix domain-containing protein.
  
 
 0.851
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.833
OSCT_1783
Hypothetical protein.
  
 0.833
OSCT_1798
Molecular chaperone-like protein.
  
 0.833
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.833
OSCT_0392
Immunoglobulin I-set domain protein.
  
 
 0.823
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.