STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3005Beta-lactamase domain protein. (299 aa)    
Predicted Functional Partners:
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
  
 0.795
OSCT_3006
PSP1 domain-containing protein.
       0.732
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
       0.732
OSCT_3004
Colicin V production protein.
       0.718
OSCT_1666
Hypothetical protein.
    
 0.602
OSCT_0507
Beta-ketoacyl synthase.
   
 0.494
OSCT_2904
Sulphate transporter.
  
 0.469
OSCT_2394
Transcriptional regulator, LuxR family.
    
 
 0.463
OSCT_3008
Hypothetical protein.
       0.461
OSCT_2169
AD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.460
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.