STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3010Beta-lactamase domain protein. (292 aa)    
Predicted Functional Partners:
OSCT_3011
Metal-dependent hydrolase.
 
    
0.850
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
     0.719
OSCT_2849
Response regulator receiver.
 
    0.588
OSCT_1993
Cyclic nucleotide-binding protein.
  
     0.446
OSCT_1112
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
     0.445
OSCT_3009
Response regulator receiver.
       0.439
OSCT_2056
Phosphonate C-P lyase system protein PhnL.
  
  
 0.409
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.