OSCT_3038 protein (Oscillochloris trichoides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

OSCT_3038

Major facilitator transporter. (464 aa)

Predicted Functional Partners:

OSCT_2365

0.581

OSCT_0507

0.523

OSCT_3039

0.473

OSCT_0837

0.435

OSCT_3040

0.416

OSCT_2591

0.412

OSCT_2664

0.412

Your Current Organism:

Oscillochloris trichoides

NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
OSCT_0507	OSCT_0837	Beta-ketoacyl synthase.	Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).	0.410
OSCT_0507	OSCT_2365	Beta-ketoacyl synthase.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.791
OSCT_0507	OSCT_3038	Beta-ketoacyl synthase.	Major facilitator transporter.	0.523
OSCT_0507	OSCT_3039	Beta-ketoacyl synthase.	Phospholipid/glycerol acyltransferase.	0.692
OSCT_0507	OSCT_3040	Beta-ketoacyl synthase.	NAD-dependent epimerase/dehydratase.	0.589
OSCT_0837	OSCT_0507	Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).	Beta-ketoacyl synthase.	0.410
OSCT_0837	OSCT_2365	Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.914
OSCT_0837	OSCT_3038	Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).	Major facilitator transporter.	0.435
OSCT_2365	OSCT_0507	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Beta-ketoacyl synthase.	0.791
OSCT_2365	OSCT_0837	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like).	0.914
OSCT_2365	OSCT_2591	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Fe-S-cluster-containing hydrogenase components 1-like protein.	0.858
OSCT_2365	OSCT_2664	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Fe-S-cluster-containing hydrogenase components 1-like protein.	0.858
OSCT_2365	OSCT_3038	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Major facilitator transporter.	0.581
OSCT_2591	OSCT_2365	Fe-S-cluster-containing hydrogenase components 1-like protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.858
OSCT_2591	OSCT_2664	Fe-S-cluster-containing hydrogenase components 1-like protein.	Fe-S-cluster-containing hydrogenase components 1-like protein.	0.997
OSCT_2591	OSCT_3038	Fe-S-cluster-containing hydrogenase components 1-like protein.	Major facilitator transporter.	0.412
OSCT_2664	OSCT_2365	Fe-S-cluster-containing hydrogenase components 1-like protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.858
OSCT_2664	OSCT_2591	Fe-S-cluster-containing hydrogenase components 1-like protein.	Fe-S-cluster-containing hydrogenase components 1-like protein.	0.997
OSCT_2664	OSCT_3038	Fe-S-cluster-containing hydrogenase components 1-like protein.	Major facilitator transporter.	0.412
OSCT_3038	OSCT_0507	Major facilitator transporter.	Beta-ketoacyl synthase.	0.523

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About