STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3039Phospholipid/glycerol acyltransferase. (432 aa)    
Predicted Functional Partners:
OSCT_3040
NAD-dependent epimerase/dehydratase.
 
    0.957
OSCT_2101
GMC oxidoreductase family.
  
  
  0.752
OSCT_0507
Beta-ketoacyl synthase.
  
 0.692
OSCT_1453
Hypothetical protein.
  
   0.647
OSCT_1897
TetR family transcriptional regulator.
  
     0.598
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.590
OSCT_1780
Hypothetical protein.
  
     0.584
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
 
 0.544
OSCT_1880
Hypothetical protein.
  
     0.540
OSCT_1776
Signal transduction protein.
  
     0.533
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.