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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3040NAD-dependent epimerase/dehydratase. (326 aa)    
Predicted Functional Partners:
OSCT_3039
Phospholipid/glycerol acyltransferase.
 
    0.960
OSCT_0909
Nucleotide sugar dehydrogenase.
  
 0.944
OSCT_1238
Galactose-1-phosphate uridylyltransferase.
   
 
 0.907
OSCT_2637
Galactose-1-phosphate uridylyltransferase.
   
 
 0.907
OSCT_1396
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.850
OSCT_0507
Beta-ketoacyl synthase.
  
 0.800
OSCT_0551
Glutamate synthase (ferredoxin).
    
  0.789
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.777
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.769
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.762
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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