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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3059Glycosyl transferase group 1. (419 aa)    
Predicted Functional Partners:
OSCT_0626
Glycosyl transferase group 1.
  
  
  0.906
OSCT_3060
Peptidase M23B.
 
    0.801
OSCT_0477
NAD-dependent epimerase/dehydratase.
  
 
  0.774
OSCT_1740
Hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
 
 
 
  0.761
OSCT_1276
Glycosyl transferase, group 1.
  
     0.760
OSCT_3061
Serine/threonine protein kinase.
       0.757
OSCT_2824
Glycosyl transferase group 1.
  
     0.739
OSCT_1318
Glycosyl transferase, group 1.
  
  
 
0.738
OSCT_0457
Glycosyl transferase group 1.
  
     0.737
OSCT_1762
Glycosyl transferase group 1.
  
  
 
0.737
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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