STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3076Histidine kinase. (363 aa)    
Predicted Functional Partners:
OSCT_1937
Two-component response regulator.
 
   0.970
OSCT_2613
Hypothetical protein.
 
 
 0.968
OSCT_3077
Two component transcriptional regulator, winged helix family.
   0.958
OSCT_0101
Response regulator receiver.
 
   0.926
OSCT_2349
PAS sensor protein.
 0.919
OSCT_1227
PAS sensor protein.
 
 
0.916
OSCT_1310
PAS fold family protein.
 
 
0.898
OSCT_2550
OmpR subfamily.
 
   0.886
OSCT_0973
Two component transcriptional regulator.
 
   0.881
OSCT_1188
Histidine kinase.
 
 
0.870
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.