STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3097Anti-sigma-factor antagonist. (287 aa)    
Predicted Functional Partners:
OSCT_0593
Stage II sporulation E family protein.
  
 0.932
OSCT_0594
Cyclic nucleotide-binding protein.
  
 0.932
OSCT_1350
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
  0.888
OSCT_1765
ATPase domain-containing protein.
  
  0.888
OSCT_1351
Protein serine/threonine phosphatase.
  
  0.872
OSCT_1227
PAS sensor protein.
  
 
 0.855
OSCT_1310
PAS fold family protein.
  
 
 0.839
OSCT_0739
Sensory box histidine kinase/response regulator.
  
 
 0.819
OSCT_1228
Multi-sensor signal transduction histidine kinase.
  
 
 0.763
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.640
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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