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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3116NADH dehydrogenase. (160 aa)    
Predicted Functional Partners:
OSCT_1359
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
 
 0.819
OSCT_2074
UBA/THIF-type NAD/FAD binding protein.
    
 0.695
OSCT_0044
ABC-2 type transporter.
  
  
 0.618
OSCT_1069
ABC-2 type transporter.
  
  
 0.618
OSCT_2403
precorrin-3B C17-methyltransferase.
    
 0.616
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.570
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
  
 0.554
OSCT_1452
Flavin reductase domain protein FMN-binding.
  
 
 0.502
OSCT_2398
Adenosylcobinamide-phosphate guanylyltransferase.
  
 
 0.493
OSCT_2652
NADPH-dependent FMN reductase.
 
  
 0.490
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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