STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3141YD repeat protein. (667 aa)    
Predicted Functional Partners:
OSCT_3142
YD repeat protein.
    0.986
OSCT_1162
Galactose oxidase.
    
 0.955
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.944
OSCT_2698
Na-Ca exchanger/integrin-beta4.
 
 
 0.900
OSCT_0024
Hypothetical protein.
  
 
 0.884
OSCT_2562
Hypothetical protein.
  
 
  0.847
OSCT_2991
Hypothetical protein.
  
 
 0.836
OSCT_2465
Probable aggregation factor core protein MAFp3, isoform C.
 
 0.808
OSCT_1370
Cna B domain-containing protein.
 
 0.806
OSCT_1435
Hypothetical protein.
  
 
  0.806
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.