Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_3141YD repeat protein. (667 aa)    
Predicted Functional Partners:
OSCT_3142
YD repeat protein.
     0.985
OSCT_2698
Na-Ca exchanger/integrin-beta4.
 
 
 0.918
OSCT_0024
Hypothetical protein.
  
 
 0.906
OSCT_1162
Galactose oxidase.
    
 0.900
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.883
OSCT_2562
Hypothetical protein.
  
 
 0.861
OSCT_1435
Hypothetical protein.
  
 
 0.831
OSCT_1505
Hypothetical protein.
  
 
 0.831
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.827
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.822
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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