STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3149Hypothetical protein. (685 aa)    
Predicted Functional Partners:
OSCT_3148
Two component transcriptional regulator, winged helix family.
       0.766
OSCT_3150
Hypothetical protein.
       0.736
OSCT_0392
Immunoglobulin I-set domain protein.
   
 
 0.630
OSCT_3147
GAF sensor signal transduction histidine kinase.
       0.534
OSCT_1889
Citrate synthase I; Belongs to the citrate synthase family.
    
   0.532
OSCT_2718
Hypothetical protein; Belongs to the citrate synthase family.
    
   0.532
OSCT_2395
Hypothetical protein.
   
 0.515
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
 0.500
OSCT_3151
Hypothetical protein.
       0.500
OSCT_3152
Fe-S metabolism associated SufE.
       0.485
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.