STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_3160rfaE bifunctional protein. (164 aa)    
Predicted Functional Partners:
OSCT_1296
PfkB domain protein.
  
  0.988
OSCT_1855
Phosphoheptose isomerase.
  
 0.984
OSCT_0740
Glycosyl transferase family protein.
 
 
 0.877
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
      0.589
OSCT_2899
Glycosyl transferase family 2.
    
 0.553
OSCT_1666
Hypothetical protein.
    
  0.526
OSCT_0016
Glycosyl transferase family 2.
    
  0.415
OSCT_0028
Glycosyl transferase group 1.
    
  0.415
OSCT_0713
Glycosyl transferase family protein.
    
  0.415
OSCT_0852
Glycosyl transferase, group 1.
    
  0.415
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.